STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkA3TrkA3; Na+/H+ antiporter (TrkA-N:TrkA-C). (837 aa)    
Predicted Functional Partners:
mtp
Mtp; Multiphosphoryl transfer protein Mtp (PTS system, EIIA, EIIB, EIII-Fru transfer domains).
  
  
 0.941
trkB
TrkB; Potassium uptake system, membrane component TrkB (Trk family protein).
  
 
 0.851
trkH
TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.851
dtd
Dtd; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.801
ACN17403.1
Putative Di- and tricarboxylate transporter.
  
 
 0.797
ACN15384.1
Hypothetical protein.
     
 0.789
ACN15383.1
Signal transduction family protein (GGDEF domain protein).
  
  
 0.755
flgG1
FlgG1; Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.755
flgG2
FlgG2; Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family.
    
   0.755
flgF
FlgF; Flagellar basal-body rod protein FlgF.
    
   0.755
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.