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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exeA2ExeA2; Type II secretory pathway, component ExeA (ATPase). (555 aa)    
Predicted Functional Partners:
flgC
FlgC; Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
 
 0.813
gumC1
GumC1; Protein GumC involved in exopolysaccharide biosynthesis.
 
   
 0.786
ACN15397.1
Hypothetical protein.
       0.774
rfbB
RfbB; dTDP-glucose 4,6-dehydratase RfbB; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
       0.773
glnQ5
GlnQ5; Glutamine transport system, ATP-binding protein GlnQ5.
       0.762
ACN15177.1
Tetratricopeptide (TPR) domain protein.
 
 
 0.745
mltD2
MltD2; Membrane-bound lytic murein transglycosylase MltD [Precursor].
   
 
 0.745
aglW
AglW; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.723
ACN15129.1
Tetratricopeptide (TPR) domain protein.
 
   
 0.697
glnP6
GlnP6; Glutamine transport system, permease protein GlnP6 (His/Glu/Gln/Arg-transporter family protein).
       0.695
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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