STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15412.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
ACN15413.1
Conserved hypothetical protein.
       0.788
rhlE2
RhlE2; ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family.
       0.625
cbiP
CbiP; Cobalamin (vitamin B12) biosynthesis protein, predicted accessory protein CbiP.
       0.431
cbiM
CbiM; Cobalamin (vitamin B12) biosynthesis protein CbiM.
       0.431
cbiN
CbiN; ABC-type cobalt importer, accessory protein CbiN (transmembrane protein).
       0.431
cbiQ1
CbiQ1; ABC-type cobalt importer, permease protein CbiQ1.
       0.431
cbiO1
CbiO1; ABC-type cobalamin importer, ATP-binding protein CbiO1.
       0.431
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.