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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15460.1Putative lipase/hydrolase. (207 aa)    
Predicted Functional Partners:
ACN15462.1
ABC-type transporter, permease protein.
 
     0.955
ACN15461.1
ABC-type transporter, ATP-binding protein.
 
     0.905
ACN15459.1
ParA family protein.
  
    0.744
ACN15282.1
Hypothetical protein.
 
 
 0.716
ACN15458.1
Hypothetical protein.
       0.698
ACN13687.1
Putative protease.
  
 
 0.672
ACN16274.1
Predicted polyketide synthase.
  
  
 0.517
ACN13483.1
Putative virulence factor (pectin lyase fold protein).
  
 
 0.513
glgB2
GlgB2; 1,4-alpha-glucan branching enzyme GlgB (Starch branching enzyme IIB).
  
    0.479
glgA1
GlgA1; Glycogen synthase GlgA (Starch [bacterial glycogen] synthase).
     
 0.474
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.