STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15462.1ABC-type transporter, permease protein. (857 aa)    
Predicted Functional Partners:
ACN15460.1
Putative lipase/hydrolase.
 
     0.955
ACN15461.1
ABC-type transporter, ATP-binding protein.
 
  
 0.927
ACN15459.1
ParA family protein.
       0.727
ACN15458.1
Hypothetical protein.
       0.698
ACN17354.1
Putative ABC-type transport system, hydrolase component.
  
  
 0.600
glgA1
GlgA1; Glycogen synthase GlgA (Starch [bacterial glycogen] synthase).
       0.466
glgB2
GlgB2; 1,4-alpha-glucan branching enzyme GlgB (Starch branching enzyme IIB).
       0.466
ACN15430.1
Putative hydrolase (haloacid dehalogenase-like family protein); Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding pr [...]
  
     0.413
ACN15967.1
Putative Zn-dependent metalloprotease (TPR repeat protein).
  
    0.401
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.