STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lguLLguL; Lactoylglutathione lyase IguL. (122 aa)    
Predicted Functional Partners:
gloB
GloB; Zn-dependent hydroxyacylglutathione hydrolase GloB; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
    
 0.943
ACN16205.1
Putative metallo-beta-lactamase family protein.
    
 0.911
aldA
AldA; Aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
  
 
 0.910
ACN13406.1
Conserved hypothetical protein.
    
 0.904
trpB
TrpB; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.822
ACN16353.1
NAD(P)H-dependent dehydrogenase/reductase.
 
  
 0.811
ACN13896.1
Predicted flavin-containing monoamine oxidase.
   
 
 0.810
trpA
TrpA; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
  0.800
tpxA
TpxA; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
     
 0.752
ACN13738.1
Conserved hypothetical protein.
  
     0.742
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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