STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaK2PaaK2; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (434 aa)    
Predicted Functional Partners:
ACN15485.1
ACT domain protein.
 
   0.921
ACN17013.1
Acetamidase/formamidase family protein.
     
  0.900
ACN14184.1
ACT domain-containing family protein.
 
   0.689
crtA2
CrtA2; 3-hydroxybutyryl-CoA dehydratase CrtA (Crotonase); Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.485
iorA2
IorA2; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.467
ACN17732.1
Extracellular ligand-binding receptor.
 
    0.455
iorB2
IorB2; Indolepyruvate:ferredoxin oxidoreductase, beta subunit IorB2.
 
  
 0.434
iorA1
IorA1; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.427
iorB1
IorB1; Indolepyruvate:ferredoxin oxidoreductase, beta subunit IorB1.
 
  
 0.416
amiC
AmiC; N-acetylmuramoyl-L-alanine amidase A.
       0.407
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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