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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiCAmiC; N-acetylmuramoyl-L-alanine amidase A. (568 aa)    
Predicted Functional Partners:
mutS
MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
     0.843
ACN15490.1
Hypothetical protein.
       0.737
crtA2
CrtA2; 3-hydroxybutyryl-CoA dehydratase CrtA (Crotonase); Belongs to the enoyl-CoA hydratase/isomerase family.
       0.733
mltD2
MltD2; Membrane-bound lytic murein transglycosylase MltD [Precursor].
 
  
 0.687
folE2
Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
  
 0.619
ACN13519.1
Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
   0.595
ACN15871.1
Peptidase M23/M37 family protein.
 
  
 0.591
ACN16979.1
Conserved hypothetical protein.
  
 
   0.582
ACN16827.1
Putative ankyrin membrane protein.
 
   0.564
ACN15339.1
Outer membrane protein (putative surface antigen).
 
   
 0.562
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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