STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
luxR1LuxR1; Two-component DNA-binding response regulator LuxR. (386 aa)    
Predicted Functional Partners:
luxR2
LuxR2; Bacterial regulatory protein LuxR.
  
   
 0.828
ACN16572.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  
 0.777
ACN17838.1
Conserved hypothetical protein.
  
     0.731
dctQ4
DctQ4; TRAP-type C4-dicarboxylate permease, small subunit DctQ4.
 
     0.710
ACN16571.1
TRAP-type C4-dicarboxylate transport system, large permease component.
 
  
 0.703
ACN17721.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.697
dctM4
DctM4; TRAP-type C4-dicarboxylate permease, large subunit DctM4.
 
  
 0.677
ACN17722.1
Putative TRAP C4-dicarboxylate transport system permease DctM subunit.
 
  
 0.632
dctQ3
DctQ3; TRAP-type C4-dicarboxylate permease, small subunit DctQ3.
 
  
 0.619
dctM3
DctM3; TRAP-type C4-dicarboxylate permease, large subunit DctM3.
 
  
 0.570
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.