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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
putPPutP; Na+/solute-dependent symporter PutP (Na(+)-dependent symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (458 aa)    
Predicted Functional Partners:
putA1
PutA1; Bifunctional protein PutA [Includes: Proline dehydrogenase; P5C dehydrogenase].
  
  
 0.815
cstA
CstA; Carbon starvation protein CstA.
  
    0.679
ACN14676.1
Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.618
aldA
AldA; Aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
  
  
 0.551
ACN14276.1
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.551
putA2
PutA2; NAD-dependent aldehyde dehydrogenase PutA; Belongs to the aldehyde dehydrogenase family.
  
  
 0.551
ACN16918.1
NAD-dependent aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.551
pxpA
Putative lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.542
hdrD3
HdrD3; Heterodisulfide reductase, subunit HdrD3 (HdrCB homologue protein).
   
    0.541
ACN14004.1
Conserved hypothetical protein; Belongs to the AAA ATPase family.
  
 
 
 0.528
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.