STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15528.1Putative dehydrogenase. (82 aa)    
Predicted Functional Partners:
ACN15527.1
Putative short-chain dehydrogenase (SDR-family protein).
 
 0.987
ACN14606.1
Zinc-containing oxidoreductase.
 
  
 0.744
ACN16274.1
Predicted polyketide synthase.
  
 
 0.692
ACN16399.1
Putative amino-acid acetyltransferase.
  
 
 0.621
ACN15446.1
Putative multi-domain beta-ketoacyl polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 
 0.526
ACN17910.1
Cation-efflux family protein.
  
  
 0.522
ACN16079.1
Hypothetical protein.
  
  
 0.517
polA
PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
  
 0.475
ACN15529.1
Transcriptional regulator (MarR-family protein).
       0.469
ACN13979.1
Zn-dependent dehydrogenase.
  
  
 0.467
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.