STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaJ4DnaJ4; Heat shock protein DnaJ (TPR repeat protein, chaperone). (171 aa)    
Predicted Functional Partners:
htpG
HtpG; Molecular chaperone. Has ATPase activity.
  
 0.878
dapB
DapB; Dihydrodipicolinate reductase DapB (DHPR); Belongs to the DapB family.
  
  
 0.863
ACN16274.1
Predicted polyketide synthase.
  
 
 0.847
grpE
GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interacti [...]
  
 
 0.808
ACN15564.1
Two-component fusion protein (glucose-1-phosphate adenylyltransferase/aminoglycoside phosphotransferase).
  
 
 0.796
ACN15561.1
HDIG family protein.
       0.779
dnaK1
DnaK1; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.777
ACN15200.1
Conserved hypothetical protein.
  
 0.777
dnaK2
DnaK2; Chaperone hsp70 family protein DnaK.
  
 0.777
dnaK3
DnaK3; Chaperone heat-shock protein DnaK.
  
 0.777
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.