STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15564.1Two-component fusion protein (glucose-1-phosphate adenylyltransferase/aminoglycoside phosphotransferase). (565 aa)    
Predicted Functional Partners:
selB
SelB; Selenocysteine-specific translation elongation factor SelB.
    
 0.999
plsB
PlsB; Glycerol-3-phosphate acyltransferase PlsB (GPAT); Belongs to the GPAT/DAPAT family.
 
     0.851
dapB
DapB; Dihydrodipicolinate reductase DapB (DHPR); Belongs to the DapB family.
 
    0.835
rfbC1
RfbC1; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.825
rfbC2
RfbC2; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.825
dnaJ4
DnaJ4; Heat shock protein DnaJ (TPR repeat protein, chaperone).
  
 
 0.796
manC
ManC; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ManC; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.788
rfbA1
RfbA1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.755
rfbA2
RfbA2; Glucose-1-phosphate thymidylyltransferase RfbA2, long form.
  
  
 0.755
ACN15904.1
Putative galactokinase.
 
  
 0.736
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.