STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15566.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
ACN15564.1
Two-component fusion protein (glucose-1-phosphate adenylyltransferase/aminoglycoside phosphotransferase).
       0.487
plsB
PlsB; Glycerol-3-phosphate acyltransferase PlsB (GPAT); Belongs to the GPAT/DAPAT family.
       0.484
ACN15561.1
HDIG family protein.
       0.449
dnaJ4
DnaJ4; Heat shock protein DnaJ (TPR repeat protein, chaperone).
       0.449
dapB
DapB; Dihydrodipicolinate reductase DapB (DHPR); Belongs to the DapB family.
       0.449
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.