STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15615.1Conserved hypothetical protein. (103 aa)    
Predicted Functional Partners:
ACN15616.1
Putative acetyltransferase (GNAT-family protein).
 
 
 
 0.987
ACN17481.1
Acetyltransferase (GNAT family protein).
 
 
 
 0.942
ACN17570.1
Conserved hypothetical protein.
  
     0.632
speE1
SpeE1; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
   
 
 0.599
ACN14100.1
Acetyltransferase (GNAT family protein).
   
 
 0.599
ACN14433.1
Histone deacetylase superfamily protein.
   
 
 0.599
ACN14828.1
Putative acetyltransferase.
   
 
 0.599
ACN15541.1
Hypothetical protein.
  
     0.590
ACN16990.1
TPR domain family protein.
  
     0.580
ACN16150.1
Transposase (IS4 element).
  
     0.575
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.