STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15626.1Putative acetyltransferase (hexapeptide repeat family protein). (54 aa)    
Predicted Functional Partners:
cpsE
CpsE; Galactosyl transferase CspE (type III capsular polysaccharide synthesis).
  
  
 0.738
rfbP
RfbP; Undecaprenyl-phosphate (UDP)-galactose-phosphotransferase RfbP (Galactosyl-P-P-undecaprenol synthetase).
  
  
 0.738
gumC2
GumC2; Exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase).
  
  
 0.569
ACN15627.1
Putative 3-beta-hydroxysteroid sulfotransferase (Phenol sulfotransferase).
     
 0.529
manC
ManC; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ManC; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.523
ACN15625.1
Hypothetical protein.
  
  
 0.518
cysE2
CysE2; Serine O-acetyltransferase CysE2 (bacterial transferase hexapeptide repeat family).
  
  
 0.518
ACN16079.1
Hypothetical protein.
  
  
 0.509
ACN15623.1
Lipopolysaccharide biosynthesis protein.
  
  
 0.476
ACN13435.1
Aminotransferase, DegT/DnrJ/EryC1-family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.466
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.