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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15630.1Putative lipopolysaccharide N-acetyl-glycoaminyltransferase. (277 aa)    
Predicted Functional Partners:
ACN15631.1
Fe-S oxidoreductase (radical SAM family protein).
     0.962
ACN15632.1
Putative capsular polysaccharide bisynthesis glycosyl transferase.
 
     0.930
rfbP
RfbP; Undecaprenyl-phosphate (UDP)-galactose-phosphotransferase RfbP (Galactosyl-P-P-undecaprenol synthetase).
 
  
 0.643
ACN17767.1
Putative ATP-dependent DNA helicase.
    
 
 0.633
cpsE
CpsE; Galactosyl transferase CspE (type III capsular polysaccharide synthesis).
 
  
 0.628
ACN15622.1
Putative glycosyl transferase RfaG.
  
     0.593
ugd
Ugd; UDP-glucose 6-dehydrogenase Ugd.
 
  
 0.589
galE2
GalE2; NAD-dependent epimerase/dehydratase GalE.
 
  
 0.568
ACN15095.1
Hypothetical protein.
  
     0.564
rfaG1
RfaG1; Glycosyltransferase RfaG (cell wall biogenesis protein).
  
     0.562
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.