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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15637.1Putative lipopolysaccharide N-acetyl-glycoaminyltransferase. (291 aa)    
Predicted Functional Partners:
ACN15519.1
Putative flagellin.
  
     0.694
smuG
SmuG; Monofunctional, single-strand selective uracil-DNA glycosylase SmuG.
 
     0.685
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
     0.642
hemN2
HemN2; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.580
cpsE
CpsE; Galactosyl transferase CspE (type III capsular polysaccharide synthesis).
  
  
 0.504
rfbP
RfbP; Undecaprenyl-phosphate (UDP)-galactose-phosphotransferase RfbP (Galactosyl-P-P-undecaprenol synthetase).
  
  
 0.504
ftcD2
FtcD2; Formimidoyltransferase-cyclodeaminase FtcD.
  
     0.500
ACN17965.1
Single-strand binding protein (Helix-destabilizing protein).
  
    0.488
ftcD1
FtcD1; Formimidoyltransferase-cyclodeaminase FtcD.
  
     0.482
rpsP
RpsP; 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
     0.476
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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