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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbPRfbP; Undecaprenyl-phosphate (UDP)-galactose-phosphotransferase RfbP (Galactosyl-P-P-undecaprenol synthetase). (480 aa)    
Predicted Functional Partners:
gumC2
GumC2; Exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase).
 
  
 0.995
manC
ManC; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ManC; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.990
ACN16079.1
Hypothetical protein.
  
  
 0.962
ACN15069.1
Putative exopolysaccharide biosynthesis protein (protein-tyrosine kinase).
 
  
 0.946
ACN15639.1
Hypothetical protein.
 
  
 0.943
ACN15652.1
O-antigen polymerase involved in exopolysaccharide biosynthesis.
 
  
 0.923
arnB
ArnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.920
ACN13435.1
Aminotransferase, DegT/DnrJ/EryC1-family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.918
ACN16744.1
Putative pyridoxal-phosphate-dependent aminotransferase.
  
  
 0.907
gumA
GumA; Periplasmic exopolysaccharide export protein GumA.
 
  
 0.892
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.