Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN15643.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
ACN15645.1
Putative signal sequence peptidase.
       0.778
ACN15642.1
Hypothetical protein.
       0.773
ACN15644.1
Hypothetical protein.
       0.773
msbA2
MsbA2; ABC-type transporter, ATP-binding protein MsbA.
 
     0.586
lgt
Lgt; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
  
 0.585
mtp
Mtp; Multiphosphoryl transfer protein Mtp (PTS system, EIIA, EIIB, EIII-Fru transfer domains).
   
 
 0.581
ACN16293.1
Putative cAMP-dependent protein kinase, regulatory subunit.
  
   
 0.537
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
   
 
 0.518
ACN15652.1
O-antigen polymerase involved in exopolysaccharide biosynthesis.
 
     0.508
gumC2
GumC2; Exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase).
 
 
   0.506
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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