STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15649.1Conserved hypothetical protein. (437 aa)    
Predicted Functional Partners:
gumC2
GumC2; Exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase).
 
   
 0.954
ACN15652.1
O-antigen polymerase involved in exopolysaccharide biosynthesis.
 
     0.940
gumA
GumA; Periplasmic exopolysaccharide export protein GumA.
 
     0.939
ACN15654.1
Putative methyl-accepting chemotaxis transmembrane protein.
  
     0.762
ACN14022.1
Putative two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein).
  
     0.594
ACN16713.1
Putative signal transduction protein.
  
     0.570
ACN16745.1
Conserved hypothetical protein.
  
     0.503
ACN15648.1
Hypothetical protein.
       0.486
ACN16792.1
TPR repeat family protein.
  
     0.486
ACN17389.1
Hypothetical protein.
  
    0.471
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.