Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmcC1TmcC1; Membrane-bound heme containing protein TmcC1. (219 aa)    
Predicted Functional Partners:
ACN15672.1
Putative WD-40 repeat protein.
 
     0.946
tmcB1
TmcB1; Cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin).
 
 
 0.925
tmcA1
TmcA1; Acidic type II cytochrome TmcA1 (TpII-c3).
 
    0.916
narG
NarG; Respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.848
narH
NarH; Nitrate reductase, beta subunit.
  
 
 0.824
ACN15678.1
Sensory box histidine kinase and response regulator protein.
 
     0.797
ACN15677.1
Sensory box histidine kinase and response regulator protein.
 
    0.789
tmcB2
TmcB2; Cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin).
  
   
 0.779
ACN15676.1
Two-component response receiver and regulator protein.
 
     0.752
narJ
NarJ; Nitrate reductase, delta subunit.
  
  
 0.722
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.