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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15685.1Putative GTP-binding protein. (71 aa)    
Predicted Functional Partners:
bioB1
BioB1; Biothin synthethase BioB.
 
   
 0.802
hydA1
HydA1; Fe-only fusion hydrogenase HydA1 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
 
   
 0.790
hydA2
HydA2; Fe-only fusion hydrogenase HydA2 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
 
   
 0.789
dnaG9
DnaG9; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.783
ACN13273.1
GTPase.
  
     0.775
ACN15686.1
Hypothetical protein.
       0.773
bioB2
BioB2; Biotin synthetase (Biotin synthetase).
 
   
 0.696
gpsA2
GpsA2; Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.651
gpsA1
GpsA1; Glycerol-3-phosphate dehydrogenase [NAD(P)+].
  
  
 0.638
cmk1
Cmk1; Cytidine monophosphate kinase Cmk.
  
  
 0.633
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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