STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hydA2HydA2; Fe-only fusion hydrogenase HydA2 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain). (599 aa)    
Predicted Functional Partners:
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
 
 
 
 0.979
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
 
 0.970
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
 
 
 0.967
fdhA1
FdhA1; NADH-dependent, cytoplasmic formate dehydrogenase, alpha subunit FdhA1 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.922
fdhA3
FdhA3; NADH-dependent, cytoplasmic formate dehydrogenase, alpha chain FdhA3 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.906
fdhA4
FdhA4; Formate dehydrogenase, alpha chain FdhA4; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.893
ACN17765.1
Cytochrome c, class III family protein.
    
   0.803
bioB1
BioB1; Biothin synthethase BioB.
 
  
 0.802
ACN13273.1
GTPase.
 
   
 0.790
ACN15685.1
Putative GTP-binding protein.
 
   
 0.789
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.