STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspA14UspA14; Universal stress protein UspA6. (177 aa)    
Predicted Functional Partners:
uspA6
UspA6; Universal stress protein UspA.
  
     0.762
uspA1
UspA1; Universal stress protein UspA.
  
     0.737
uspA8
UspA8; Putative universal stress protein UspA.
  
     0.736
uspA11
UspA11; Universal stress protein UspA3.
  
     0.735
ACN15764.1
Putative TRAP-type transporter, 4TM/12TM fusion protein.
  
    0.716
ACN15765.1
Putative TRAP-type transporter, periplasmic component (TAXI family protein).
       0.524
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.