STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galE1GalE1; UDP-glucose 4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (339 aa)    
Predicted Functional Partners:
galT
GalT; Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase).
  
 0.990
ACN17914.1
Putative galactose-1-phosphate uridylyltransferase.
  
 0.978
gtaB
GtaB; UTP-glucose-1-phosphate uridylyltransferase GtaB.
  
 0.960
ugd
Ugd; UDP-glucose 6-dehydrogenase Ugd.
  
 
 0.946
galE2
GalE2; NAD-dependent epimerase/dehydratase GalE.
 
0.925
gmhB
GmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB.
    
 0.897
ACN17912.1
Hypothetical protein.
  
 
 0.792
ACN17317.1
Conserved hypothetical protein.
  
 
 0.787
ACN15782.1
Two-component response receiver and regulator protein.
       0.779
rimK1
RimK1; Ribosomal protein S6 modification protein RimK.
       0.779
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.