STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiO2CbiO2; ABC-type cobalt importer, ATP-binding protein CbiO2. (252 aa)    
Predicted Functional Partners:
cbiQ2
CbiQ2; ABC-type cobalt importer, permease protein CbiQ2.
 
 0.997
ACN15787.1
BioY family protein.
 
 0.996
birA
BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
    0.872
cbiQ3
CbiQ3; ABC-type cobalt importer, permease protein CbiQ3.
 
 
 0.866
cbiQ1
CbiQ1; ABC-type cobalt importer, permease protein CbiQ1.
  
 
 0.842
livG3
LivG3; ABC-type branched chain amino acid transporter, ATP-binding protein LivG.
 
    
0.801
cbiM
CbiM; Cobalamin (vitamin B12) biosynthesis protein CbiM.
  
 
 0.745
braF
BraF; Branched-chain amino acid transport ATP-binding protein BraF.
 
    
0.742
ACN16428.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATP binding component (ATPase).
  
   
 0.655
ACN14326.1
ABC-type Mn2+/Zn2+ transport system, ATPase component.
 
   
0.566
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.