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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mauEMauE; Methylamine utilization protein MauE. (148 aa)    
Predicted Functional Partners:
ACN15805.1
Putative rhodanese-like sulfurtransferase family protein.
 
   
 0.918
ACN15806.1
TPR repeat family protein.
       0.773
ftsB
FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
       0.773
mviN
MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.765
copA
CopA; Copper-transporting P-type ATPase CopA.
  
  
 0.589
zitB
ZitB; Zinc transporter ZitB.
 
      0.588
rpsT
RpsT; Binds directly to 16S ribosomal RNA.
       0.532
ACN16299.1
Putative ATPase.
  
     0.505
fur
Fur; Ferric uptake regulation protein; Belongs to the Fur family.
     
 0.485
silP
SilP; Predicted cation-transporting P-type ATPase SilP.
  
  
 0.437
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.