STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilXPilX; Tfp (Type IV pili) assembly protein PilX. (191 aa)    
Predicted Functional Partners:
pilW
PilW; Tfp (Type IV pili) assembly protein PilW.
  
  
 0.954
pilY1
PilY1; Tfp (Type IV pili) assembly protein PilY1.
  
  
 0.944
pilV
PilV; Tfp (Type IV pili) assembly protein PilV.
  
  
 0.943
fimT
FimT; Tfp (Type IV pili) assembly / biogenesis protein FimT.
  
  
 0.918
ACN15860.1
Putative fimbrial protein PilA precursor.
  
  
 0.860
gspL
GspL; General secretion pathway protein GspL.
     
 0.539
pilO
PilO; Fimbrial biogenesis protein PilO.
  
  
 0.433
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.