STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15870.1Conserved hypothetical protein. (388 aa)    
Predicted Functional Partners:
ACN17643.1
Putative ferredoxin.
 
  
  0.978
ACN17453.1
Methionine synthase I, cobalamin-binding domain protein.
    
 0.920
asd
Asd; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
  0.913
metH2
MetH2; vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase).
    
 0.907
ACN17636.1
Probable aspartokinase (Aspartate kinase); Belongs to the aspartokinase family.
    
  0.907
patB
PatB; PLP-dependent aminotransferase PatB.
     
 0.901
hom
Homoserine dehydrogenase Hom.
     
 0.900
ahcY
AhcY; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
  0.900
metE
MetE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE (Cobalamin-independent methionine synthase).
     
  0.900
ACN15494.1
Conserved hypothetical protein.
 
   
 0.833
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.