STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15893.1Conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
srp
Srp; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
       0.752
tyrA
TyrA; Chorismate mutase/prephenate dehydrogenase.
  
     0.748
umuD1
UmuD1; SOS (error prone) mutagenis protein UmuD (DNA polymerase V); Belongs to the peptidase S24 family.
   
  
 0.670
umuD2
UmuD2; DNA polymerase V/DNA repair protein UmuD; Belongs to the peptidase S24 family.
   
  
 0.670
recN
RecN; May be involved in recombinational repair of damaged DNA.
   
  
 0.610
ACN16272.1
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.608
ACN16811.1
Pyridoxal-dependent decarboxylase family protein.
 
     0.606
ACN15799.1
Conserved hypothetical protein.
  
     0.579
recA
RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.576
ACN16274.1
Predicted polyketide synthase.
  
     0.574
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.