STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15904.1Putative galactokinase. (345 aa)    
Predicted Functional Partners:
gmhA
GmhA; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
 
 0.986
gmhB
GmhB; D,D-heptose 1,7-bisphosphate phosphatase GmhB.
 
 
 0.984
recO
RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.842
mgtE2
MgtE2; Acts as a magnesium transporter.
       0.782
glyS
GlyS; glycyl-tRNA synthetase, beta chain GlyS.
       0.775
glyQ
GlyQ; glycyl-tRNA synthetase, alpha chain GlyQ.
       0.775
ppiD2
PpiD2; Peptidyl-prolyl cis-trans isomerase protein PpiD.
       0.745
ACN15564.1
Two-component fusion protein (glucose-1-phosphate adenylyltransferase/aminoglycoside phosphotransferase).
 
  
 0.736
ACN16803.1
Putative metal-dependent hydrolase of the beta-lactamase superfamily.
  
     0.736
glmS
GlmS; Glucosamine--fructose-6-phosphate aminotransferase (D-fructose-6- phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase).
 
     0.729
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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