STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhBLdhB; Membrane-localized lactate dehydrogenase LdhB (GlcF homolog, iron-sulfur cluster-binding protein). (437 aa)    
Predicted Functional Partners:
ldhA
LdhA; Membrane-localized lactate dehydrogenase LdhA (GlcD homolog protein).
 
 0.995
glcD1
GlcD1; FAD/FMN-containing glycolate oxidase, subunit GlcD.
 
 0.979
glcD4
GlcD4; (S)-2-hydroxy-acid dehydrogenase.
 
 0.972
glcD2
GlcD2; FAD-linked glycolate oxidase subunit GlcD.
 
 0.971
glcD3
GlcD3; Glycolate oxidase, FAD-linked subunit GlcD.
 
 0.957
ACN17752.1
FAD-linked oxidase family protein (FAD-binding/FAD-oxidase domain protein).
 
 0.928
glcF1
GlcF1; Glycolate oxidase, iron-sulfur subunit GlcF.
  
  
 
0.927
glcF2
GlcF2; Glycolate oxidase, iron-sulfur subunit GlcF.
  
  
 
0.919
aldA
AldA; Aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
  
 
 0.910
gyaR
GyaR; Glyoxylate reductase GyaR; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.906
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.