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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15950.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
dppF1
DppF1; ABC-type dipeptide/oligopeptide/nickel transport system, ATP binding component DppF; Belongs to the ABC transporter superfamily.
       0.572
dppD2
DppD2; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component DppD; Belongs to the ABC transporter superfamily.
       0.572
dppE
DppE; ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic binding protein DppE.
       0.572
motA2
MotA2; Chemotaxis protein MotA (motility protein A).
       0.566
motB2
MotB2; Chemotaxis protein motB (Motility protein B).
       0.566
ACN15953.1
Hypothetical protein.
       0.566
dinP
DinP; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.566
ACN15944.1
Hypothetical protein.
       0.554
ACN15945.1
Hypothetical protein.
       0.554
ACN15946.1
Hypothetical protein.
       0.554
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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