Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
faaFaa; Long-chain acyl-CoA synthetase (AMP-forming) Faa. (810 aa)    
Predicted Functional Partners:
ACN17411.1
Putative two-component system sensor protein.
  
 
 0.918
ACN16951.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA; Cold-shock inducible two-component sensory box histidine kinase /regulatory protein (Ntr family protein).
 
 
0.875
ACN14990.1
Two-component hybrid sensor and response regulator histidine kinase.
 
 
0.869
ACN15839.1
Putative signal-transducing kinase with PAS/PAC domain.
 
 
0.857
ACN15964.1
Sensory box histidine kinase/response regulator protein.
 
 
0.856
ACN14613.1
Two component protein (response regulator/sensory box histidine kinase).
 
 
0.854
ACN17381.1
Sensory box histidine kinase/response regulator.
 
 
0.846
ACN14410.1
Sensory histidine kinase/response regulator.
 
 
0.845
barA
BarA; Signal transduction histidine kinase BarA.
 
 
0.841
ACN13383.1
Histidine kinase/response regulator.
 
 
0.828
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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