STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15958.1Two-component sensory box histidine kinase/response regulator protein. (594 aa)    
Predicted Functional Partners:
pldB
PldB; Lysophopholipase PldB (alpha/beta hydrolase family protein).
    
 0.813
rplE
RplE; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
    
 
 0.787
gmk
Gmk; Essential for recycling GMP and indirectly, cGMP.
    
  0.772
alkK2
AlkK2; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK.
 
 
 0.763
rplR
RplR; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
    
 
 0.735
ACN16274.1
Predicted polyketide synthase.
  
 
 0.684
fadD1
FadD1; long-chain-fatty-acid--CoA ligase FadD1 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
 
 
0.680
fadD7
FadD7; long-chain-fatty-acid--CoA ligase FadD7 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
 
 
0.673
fadD6
FadD6; long-chain-fatty-acid--CoA ligase FadD6 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
 
 
0.671
fadD8
FadD8; long-chain-fatty-acid--CoA ligase FadD8 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
 
 
0.671
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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