STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acuCAcuC; Acetoin utilization protein AcuC. (316 aa)    
Predicted Functional Partners:
acuB2
AcuB2; Acetoin utilization protein AcuB.
  
 0.905
ACN13896.1
Predicted flavin-containing monoamine oxidase.
   
 0.854
ACN15672.1
Putative WD-40 repeat protein.
    
 0.839
ACN14004.1
Conserved hypothetical protein; Belongs to the AAA ATPase family.
   
 0.787
rapA
RapA; RNA polymerase associated protein RapA (ATP-dependent helicase HepA).
    
 0.786
htpG
HtpG; Molecular chaperone. Has ATPase activity.
   
 0.782
ACN14418.1
Putative ATPase (AAA superfamily protein).
   
 0.699
ACN13537.1
Putative ankyrin repeat protein.
   
 0.570
thiJ
ThiJ; Peptidase C56 family protein.
   
 0.528
murJ
Conserved hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.511
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.