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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN15993.1TRAP transporter, 4TM/12TM fusion protein. (637 aa)    
Predicted Functional Partners:
ACN15992.1
TRAP transporter, solute receptor (TAXI family protein).
    0.921
ACN15191.1
TRAP-type transporter, periplasmic solute binding receptor (TAXI family protein).
    0.856
ACN14724.1
Putative TRAP-type transporter, periplasmic component (TAXI family protein).
    0.843
ACN15765.1
Putative TRAP-type transporter, periplasmic component (TAXI family protein).
    0.837
ACN17349.1
Conserved hypothetical protein.
 
    0.831
soxB2
SoxB2; Sarcosine oxidase, subunit beta SoxB.
       0.635
soxA2
SoxA2; Sarcosine oxidase, subunit alpha SoxA.
       0.635
ooxA
OoxA; Opine oxidase, subunit alpha OoxA.
       0.635
ACN15997.1
Conserved hypothetical protein.
       0.468
ilvB
IlvB; Acetolactate synthase, large subunit IlvB; Belongs to the TPP enzyme family.
       0.449
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.