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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16004.1Conserved hypothetical protein. (207 aa)    
Predicted Functional Partners:
ACN16002.1
Conserved hypothetical protein.
 
 
 0.962
ACN16003.1
Hypothetical protein.
      0.907
ACN17506.1
Putative DNA-binding protein.
 
 
 0.807
ACN17505.1
Hypothetical protein.
  
     0.740
ACN15541.1
Hypothetical protein.
  
     0.627
ACN15612.1
Putative capsule biosynthesis protein HipA.
  
     0.493
ACN14979.1
Conserved hypothetical protein.
  
     0.486
ACN15615.1
Conserved hypothetical protein.
  
     0.484
ACN16150.1
Transposase (IS4 element).
  
     0.455
ACN16498.1
Transposase (IS4 family protein).
  
     0.455
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.