STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkA1PrkA1; Serine protein kinase PrkA. (270 aa)    
Predicted Functional Partners:
ACN15540.1
Two-component hybrid protein, sensory box hisitidine kinase/adenylate cyclase.
 
 
 0.900
ACN15670.1
Two-component response receiver and regulator protein.
   
 0.846
ACN17064.1
Sigma-54 dependent DNA-binding response regulator.
  
 
   0.660
ACN17412.1
Putative chemotaxis response regulator.
     0.643
ACN14478.1
Two-component hybrid sensor protein.
  
   0.636
ACN17411.1
Putative two-component system sensor protein.
 
 
0.633
ACN16165.1
Predicted two-component response regulator.
  
 
 
 0.631
ACN16519.1
Putative chemotaxis response regulator receiver (CheY-like).
  
 
   0.625
ACN16882.1
Two-component response regulator (CheY-like receiver domain and a winged-helix DNA-binding domain).
 
 0.622
ACN13844.1
Response regulator (CheY-like receiver domain).
 
 0.621
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.