STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mptNMptN; tetrahydromethanopterin:alpha-L-glutamate ligase MptN (H(4)MPT:alpha-L-glutamate ligase); Belongs to the RimK family. (418 aa)    
Predicted Functional Partners:
rimK2
RimK2; Ribosomal protein S6 modification protein RimK.
     0.995
aspA
AspA; Succinylglutamate desuccinylase/aspartoacylase family protein AspA.
     0.951
ACN16028.1
Conserved hypothetical protein.
       0.666
rsmB
RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.640
trkA3
TrkA3; Na+/H+ antiporter (TrkA-N:TrkA-C).
  
 
 0.598
trkB
TrkB; Potassium uptake system, membrane component TrkB (Trk family protein).
  
 
 0.568
trkH
TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.568
mscC2
MscC2; Mechanosensitive small-conductance channel MscC2.
 
   
 0.548
purD
PurD; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR); Belongs to the GARS family.
  
  
 0.540
ACN16032.1
Hypothetical protein.
       0.526
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.