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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16032.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
ACN17558.1
Conserved hypothetical protein.
  
     0.641
flgA
FlgA; Flagella basal body P-ring formation protein FlgA [precursor].
  
     0.634
ACN15151.1
Putative signal transduction protein.
  
     0.596
ACN17566.1
Putative signal transduction protein.
  
     0.595
ACN16280.1
Predicted fusion protein, response regulator receiver (N-terminal) / sensor histidine kinase PAS/PAC (C-terminal).
  
     0.539
mptN
MptN; tetrahydromethanopterin:alpha-L-glutamate ligase MptN (H(4)MPT:alpha-L-glutamate ligase); Belongs to the RimK family.
       0.526
aspA
AspA; Succinylglutamate desuccinylase/aspartoacylase family protein AspA.
       0.526
rimK2
RimK2; Ribosomal protein S6 modification protein RimK.
       0.522
ACN15800.1
Two-component response receiver and regulator protein.
  
     0.514
ACN17725.1
Putative signal transduction protein.
  
     0.511
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.