STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16040.1moxR-type regulator protein. (324 aa)    
Predicted Functional Partners:
ACN16039.1
Conserved hypothetical protein.
 
  
 0.970
ACN16036.1
Conserved hypothetical protein.
 
  
 0.961
ACN16037.1
Conserved hypothetical protein.
 
  
 0.959
ACN16035.1
Conserved hypothetical protein.
 
  
 0.938
ACN16038.1
Hypothetical protein.
 
    0.830
pyrD
PyrD; Catalyzes the conversion of dihydroorotate to orotate.
       0.542
ACN16041.1
HTH-type transcriptional regulator.
  
  
 0.503
ACN16033.1
Putative YcaC-related amidohydrolase.
  
    0.476
mae
Mae; NAD/NADP-dependent malate dehydrogenase (malic enzyme) (NAD-ME).
  
    0.462
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.