STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16048.1ABC-type glycine betaine/proline transport system, inner membrane permease protein. (243 aa)    
Predicted Functional Partners:
ACN16049.1
ABC-type glycine betaine/proline transport system, periplasmic glycine betaine/proline-binding protein.
 
 0.999
ACN16044.1
ABC-type glycine betaine/proline transport system, ATP-binding protein (ATPase).
 0.992
ACN16047.1
ABC-type glycine betaine/proline transport system, permease protein.
 
 
 
0.990
ACN16045.1
ABC-type glycine betaine/proline transport system, inner membrane permease protein.
 
 
 
0.963
ACN16046.1
Transposase (11 DDE domain protein).
       0.538
proV
ProV; ABC-type glycine betaine transporter, ATP-binding protein ProV.
  
 0.500
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.