close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capD2CapD2; Capsular polysaccharide biosynthesis protein CapD2. (643 aa)    
Predicted Functional Partners:
arnB
ArnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.970
ACN16062.1
Putative glycosyl transferase (group 2 family protein).
  
  
 0.851
pgaC
PgaC; Biofilm biosynthesis N-glycosyltransferase PgaC.
  
  
 0.846
wecA
WecA; Undecaprenyl-phosphate- (UDP-) alpha-N-acetylglucosaminyl 1-phosphate transferase WecA.
 
   
 0.845
galE2
GalE2; NAD-dependent epimerase/dehydratase GalE.
 
  
 0.842
manC
ManC; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ManC; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.822
gumC2
GumC2; Exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase).
 
  
 0.816
ugd
Ugd; UDP-glucose 6-dehydrogenase Ugd.
 
  
 0.816
capD1
CapD1; Capsular polysaccharide biosynthesis protein CapD1.
  
  
 0.816
ACN16064.1
Putative flavin-containing amine oxidoreductase family protein.
       0.767
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.