STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16077.1Hypothetical protein. (678 aa)    
Predicted Functional Partners:
ACN14663.1
Conserved hypothetical protein.
   
 
 0.850
ACN16076.1
Putative glycosyl transferase (group 2 family protein).
     
 0.547
ACN16079.1
Hypothetical protein.
    
 0.532
gumC2
GumC2; Exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase).
     
 0.473
ACN13500.1
Conserved hypothetical protein.
    
 
 0.451
ACN14417.1
Hypothetical protein.
    
 
 0.451
ACN14420.1
Conserved hypothetical protein.
    
 
 0.451
pyrK
PyrK; Dihydroorotate dehydrogenase, electron transfer subunit PyrK.
    
 
 0.451
ACN15219.1
Fibronectin type III domain protein.
    
 
 0.451
ACN15724.1
Putative alkaline serine protease (subtilase family protein); Belongs to the peptidase S8 family.
    
 
 0.451
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.