STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16101.1Hypothetical protein. (887 aa)    
Predicted Functional Partners:
gspJ2
GspJ2; General secretion pathway protein GspK.
  
  
 0.754
gspI
GspI; General secretion pathway protein GspI.
  
  
 0.754
gspK2
GspK2; General secretion pathway protein GspK.
       0.746
htpG
HtpG; Molecular chaperone. Has ATPase activity.
  
 0.649
gspD2
GspD2; General secretion pathway protein GspD.
  
  
 0.615
gspL
GspL; General secretion pathway protein GspL.
     
 0.614
ACN16103.1
Conserved hypothetical protein.
 
     0.612
ACN15672.1
Putative WD-40 repeat protein.
   
 0.602
ACN13537.1
Putative ankyrin repeat protein.
  
 0.585
ACN16095.1
Hypothetical protein.
       0.557
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.