STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacBDacB; Includes: D-alanyl-D-alanine carboxypeptidase, D-alanyl-D-alanine-endopeptidase). (393 aa)    
Predicted Functional Partners:
ACN17414.1
Conserved hypothetical protein.
    
 0.917
ACN16595.1
Putative microcin C7 resistance protein MccF.
 
  
 0.828
ACN13537.1
Putative ankyrin repeat protein.
 
 
 
 0.821
ACN16115.1
Putative peptidase M18 family protein.
       0.773
ACN16114.1
Hypothetical protein.
       0.711
mtgA
MtgA; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 0.656
gspH
GspH; General secretion pathway protein GspH (Type II secretory pathway membrane protein).
 
     0.582
fusA1
FusA1; Translation elongation factor FusA (GTPase).
  
     0.569
ACN16113.1
Hypothetical protein.
       0.525
ACN15282.1
Hypothetical protein.
  
     0.514
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.