STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16195.1Conserved hypothetical protein. (109 aa)    
Predicted Functional Partners:
ubiB2
UbiB; Ubiquinone biosynthesis protein UbiB.
 
     0.841
acd10
Acd10; acyl-CoA dehydrogenase Acd10.
       0.705
rbr2
Rbr2; Rubrerythrin Rbr.
  
     0.562
ACN14883.1
Putative protein-specific endoprotease CAAX (prenyl protease 1).
  
   
 0.553
algJ
AlgJ; Alginate O-acetyltransferase AlgJ [precursor].
  
     0.525
ntrC2
NtrC2; Nitrate uptake ABC-transporter, ATP-binding protein NtrC.
     
 0.464
ntrB
NtrB; Nitrate uptake ABC-transporter, permease protein NtrB.
       0.457
ntrA
NtrA; Nitrate uptake ABC-transporter, periplasmic binding protein NtrA.
       0.457
ACN16193.1
Predicted ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
       0.457
ACN15654.1
Putative methyl-accepting chemotaxis transmembrane protein.
  
     0.441
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.