STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16221.1Putative aspartate/tyrosine/aromatic acid aminotransferase. (394 aa)    
Predicted Functional Partners:
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
  
 
 0.945
tyrA
TyrA; Chorismate mutase/prephenate dehydrogenase.
  
 
 0.928
pheA
PheA; Chorismate mutase/prephenate dehydratase PheA (Includes: chorismate mutase; prephenate dehydratase).
 
 
 0.928
argG
ArgG; Argininosuccinate synthase ArgG (Citrulline--aspartate ligase); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.921
putA2
PutA2; NAD-dependent aldehyde dehydrogenase PutA; Belongs to the aldehyde dehydrogenase family.
   
 0.919
purA
PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.916
ACN14021.1
Putative aminohydrolase.
  
 
 0.914
patB
PatB; PLP-dependent aminotransferase PatB.
 
  
0.914
gdhA1
GdhA1; NADP-specific glutamate dehydrogenase GdhA (NADP-GDH); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.912
aspG
AspG; L-asparaginase AspG.
    
 0.910
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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